Gustavo Glusman's guest appearances

Gustavo Glusman

the bioinformatics chat

David Kelley

Irineo Cabreros

Romain Lopez

Gabriel Misrachi

Hassan Samee

Kristina Grigaityte

Jacob Schreiber

Simeon Carstens

Trevor Pesout

HoJoon Lee

Seung Woo Cho

Kaushik Panda

Keith Slotkin

Fernando Portela

Chang Xu

OwlTail

In this episode, Gustavo Glusman explains his method of reducing a VCF fileto a small “fingerprint”, which could be then used to detect duplicate genomes,infer relatedness, map the population structure, and more. Links:  The genome fingerprints paper The genotype fingerprints preprint The data fingerprints preprint The blog post about time series visualization  If you enjoyed this episode, please consider supporting the podcast on Patreon!

In this episode, <a href="https://www.systemsbiology.org/bio/gustavo-glusman-phd/" rel="nofollow" target="_blank">Gustavo Glusman</a> explains his method of reducing a VCF file to a small “fingerprint”, which could be then used to detect duplicate genomes, infer relatedness, map the population structure, and more. Links: <ul> <li><a href="https://www.frontiersin.org/articles/10.3389/fgene.2017.00136/full" rel="nofollow" target="_blank">The genome fingerprints paper</a></li> <li><a href="https://www.biorxiv.org/content/early/2017/10/27/208025" rel="nofollow" target="_blank">The genotype fingerprints preprint</a></li> <li><a href="https://www.biorxiv.org/content/early/2018/04/02/293183" rel="nofollow" target="_blank">The data fingerprints preprint</a></li> <li><a href="https://districtdatalabs.silvrback.com/time-maps-visualizing-discrete-events-across-many-timescales" rel="nofollow" target="_blank">The blog post about time series visualization</a></li> </ul> If you enjoyed this episode, please consider supporting the podcast on <a href="https://www.patreon.com/bioinfochat" rel="nofollow" target="_blank">Patreon</a>!

#19 Genome fingerprints with Gustavo Glusman