Markus Covert's guest appearances

Markus Covert

The Future of Everything presented by Stanford Engineering

Stanford Radio

Carlos Bustamante

Margot Gerritsen

Monica Lam

Christina Smolke

Pamela Chen

Noah Rosenberg

Andrew Huberman

Robert Reich

Anne Kiremidjian

Alex Dunn

Russ Altman

Michelle Mello

Marshall Burke

Megan Palmer

Kari Nadeau

OwlTail

The Future of Everything with Russ Altman:E127 | Markus Covert: How to build a computer model of a cellA bioengineer sets out to create a computer simulation of a single living cell and comes to grips with the remarkable complexity that is life.When Stanford bioengineer Markus Covert first decided to create a computer model able to simulate the behavior of a single cell, he was held back by more than an incomplete understanding of how a cell functions, but also by a lack of computer power. His early models would take more than 10 hours to churn through a single simulation and that was when using a supercomputer capable of billions of calculations per second.Nevertheless, in his quest toward what had been deemed "a grand challenge of the 21st century," Covert pressed on and eventually published a paper announcing his success in building a model of just one microbe: E. coli, a popular subject in biological research. The model would allow researchers to run experiments not on living bacteria in a lab, but on a simulated cell on a computer.After all was said and done, however, the greatest takeaway for Covert was that a cell is a very, very complex thing. There were fits and starts and at least one transcendent conceptual leap — which Covert has dubbed “deep curation” — needed to make it all happen, but he found a way. As Covert points out, no model is perfect, but some are useful. And that is how usefulness, not perfection, became the goal of his work, as he tells fellow bioengineer Russ Altman in this episode of Stanford Engineering’s The Future of Everything podcast. Listen here, and subscribe to the podcast here.

The Future of Everything with Russ Altman: E127 | Markus Covert: How to build a computer model of a cell A bioengineer sets out to create a computer simulation of a single living cell and comes to grips with the remarkable complexity that is life. When Stanford bioengineer Markus Covert first decided to create a computer model able to simulate the behavior of a single cell, he was held back by more than an incomplete understanding of how a cell functions, but also by a lack of computer power. His early models would take more than 10 hours to churn through a single simulation and that was when using a supercomputer capable of billions of calculations per second. Nevertheless, in his quest toward what had been deemed "a grand challenge of the 21st century," Covert pressed on and eventually published a paper announcing his success in building a model of just one microbe: E. coli, a popular subject in biological research. The model would allow researchers to run experiments not on living bacteria in a lab, but on a simulated cell on a computer. After all was said and done, however, the greatest takeaway for Covert was that a cell is a very, very complex thing. There were fits and starts and at least one transcendent conceptual leap — which Covert has dubbed “deep curation” — needed to make it all happen, but he found a way. As Covert points out, no model is perfect, but some are useful. And that is how usefulness, not perfection, became the goal of his work, as he tells fellow bioengineer Russ Altman in this episode of Stanford Engineering’s The Future of Everything podcast. Listen here, and subscribe to the podcast here.

E127 | Markus Covert: How to build a computer model of a cell

When Stanford bioengineer Markus Covert first decided to create a computer model able to simulate the behavior of a single cell, he was held back by more than an incomplete understanding of how a cell functions, but also by a lack of computer power. His early models would take more than 10 hours to churn through a single simulation and that was when using a supercomputer capable of billions of calculations per second.Nevertheless, in his quest toward what had been deemed "a grand challenge of the 21st century," Covert pressed on and eventually published a paper announcing his success in building a model of just one microbe: E. coli, a popular subject in biological research. The model would allow researchers to run experiments not on living bacteria in a lab, but on a simulated cell on a computer.After all was said and done, however, the greatest takeaway for Covert was that a cell is a very, very complex thing. There were fits and starts and at least one transcendent conceptual leap — which Covert has dubbed “deep curation” — needed to make it all happen, but he found a way. As Covert points out, no model is perfect, but some are useful. And that is how usefulness, not perfection, became the goal of his work, as he tells fellow bioengineer Russ Altman in this episode of Stanford Engineering’s The Future of Everything podcast. Listen here, and subscribe to the podcast here.

When Stanford bioengineer <a href="https://profiles.stanford.edu/markus-covert" rel="nofollow" target="_blank">Markus Covert</a> first decided to create a computer model able to simulate the behavior of a single cell, he was held back by more than an incomplete understanding of how a cell functions, but also by a lack of computer power. His early models would take more than 10 hours to churn through a single simulation and that was when using a supercomputer capable of billions of calculations per second.Nevertheless, in his quest toward what had been deemed "a grand challenge of the 21st century," Covert pressed on and eventually published a paper announcing his success in building a model of just one microbe: E. coli, a popular subject in biological research. The model would allow researchers to run experiments not on living bacteria in a lab, but on a simulated cell on a computer.After all was said and done, however, the greatest takeaway for Covert was that a cell is a very, very complex thing. There were fits and starts and at least one transcendent conceptual leap — which Covert has dubbed “deep curation” — needed to make it all happen, but he found a way. As Covert points out, no model is perfect, but some are useful. And that is how usefulness, not perfection, became the goal of his work, as he tells fellow bioengineer <a href="https://profiles.stanford.edu/russ-altman" rel="nofollow" target="_blank">Russ Altman</a> in this episode of Stanford Engineering’s The Future of Everything podcast. Listen here, and <a href="https://the-future-of-everything-stanford-engineering.simplecast.com/" rel="nofollow" target="_blank">subscribe to the podcast here</a>.

Markus Covert: How to build a computer model of a cell